R/qa.R
quality_profile.RdGet the quality profiles and base calls for each cycle across all input files.
quality_profile(files, n = 10000)
| files | A data table containing the files as returned by
|
|---|---|
| n | How many reads to sample from each file. If a file has less all of them will be used. |
A list with two data tables giving the sampled metrics per cycle / base pair:
The quality scores for each cycle and sample.
The base calls for each cycle and sample.