Plots relative distribution for taxa across samples.

plot_taxa(ps, level = "Phylum", show_samples = TRUE, sort = TRUE,
  max_taxa = 12, only_data = FALSE, ...)

Arguments

ps	A phyloseq data set.
level	The taxonomy level to use. Defaults to phylum.
show_samples	Whether to show sample names.
sort	Whether to sort taxa by abundance across all samples.
max_taxa	Maximum number of different taxa to plot. If more than 12 there is probably no color scale that can visualize them.
only_data	Only get the raw data for the plot as a data table.
...	Addditional arguments passed to geom_bar.

Nothing or a data.table containing the relative abundances.

 NULL
#> NULL